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From Prompt to Pipeline: Building a scRNA-seq Workflow with Claude Code and Nextflow
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Feb 10, 2026
· 9 min read
·
AI
Deep Learning
LLM
Code
Claude
single cell
RNAseq
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Building Your First Nextflow Pipeline: PART 4 - Polish your pipeline
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Aug 31, 2025
· 8 min read
·
code
single cell
pseudoalignment
RNAseq
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Building Your First Nextflow Pipeline: PART 3 - Modularization & Configurable settings
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Aug 30, 2025
· 5 min read
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code
single cell
pseudoalignment
RNAseq
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Building Your First Nextflow Pipeline: PART 2 - Multiple Samples
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Aug 27, 2025
· 9 min read
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code
single cell
pseudoalignment
RNAseq
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Building Your First Nextflow Pipeline: PART 1 - One sample at a time
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Jul 30, 2025
· 8 min read
·
code
single cell
pseudoalignment
RNAseq
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