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  • Code

    calendar Jul 28, 2025 · 0 min read  ·
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  • Index

    calendar Jul 28, 2025 · 0 min read  ·
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  • Single Cell

    calendar Jul 28, 2025 · 0 min read  ·
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  • Dimensional Reduction

    calendar Jun 5, 2025 · 0 min read  ·
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  • Phate

    calendar May 25, 2025 · 0 min read  ·
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  • T-SNE

    calendar May 16, 2025 · 0 min read  ·
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  • UMAP

    calendar May 16, 2025 · 0 min read  ·
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  • Bioconductor

    calendar May 13, 2025 · 0 min read  ·
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  • Pseudotime

    calendar May 13, 2025 · 0 min read  ·
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  • RNA Velocity

    calendar May 13, 2025 · 0 min read  ·
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Alfonso Saera Vila

Welcome to 'Love, DNA & Code' my blog about new bioinformatics tools, single-cell & spatial applications, AI, and more.
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Featured Posts

  • Visium HD cell segmentation with Bin2Cell
  • Single cell in Python: Scanpy and AnnData

Recent Posts

  • Pseudoalignment for single cell RNA-seq with alevin-fry
  • Pairwise Controlled Manifold Approximation (PaCMAP) for Single Cell
  • Single Cell Dimensional Reduction: Phate
  • Single Cell Dimensional Reduction: t-SNE vs UMAP
  • Pseudotime Trajectory vs RNA Velocity
  • Understanding Cellular Dynamics with RNA Velocity
  • Pseudotime Trajectories with Slingshot
  • Single Cell PCA Deep Dive

Categories

BIOINFORMATICS 14 R 9 PYTHON 6 TECHNOLOGY 5

Tags

CODE 11 SINGLE CELL 11 BIOCONDUCTOR 4 RNASEQ 4 CELL SEGMENTATION 3 DIMENSIONAL REDUCTION 3 PSEUDOTIME 3 PYTHON 3 SPATIAL 3 AI 2 RNA VELOCITY 2 TRAJECTORY ANALYSIS 2 CELL ANNOTATION 1 CHATGPT 1
All Tags
AI2 BIOCONDUCTOR4 CELL ANNOTATION1 CELL SEGMENTATION3 CHATGPT1 CODE11 DEEP LEARNING1 DIMENSIONAL REDUCTION3 INDEX1 LLM1 PHATE1 PLOTS1 PSEUDOTIME3 PYTHON3 RNA VELOCITY2 RNASEQ4 SCANPY1 SCVELO1 SEURAT1 SINGLE CELL11 SPATIAL3 T-SNE1 TENSORFLOW1 TRAJECTORY ANALYSIS2 UMAP1
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Copyright © 2008–2025, Alfonso Saera plus the clarity & Hugo Authors

Copyright  COPYRIGHT © 2008–2025, ALFONSO SAERA PLUS THE CLARITY & HUGO AUTHORS. All Rights Reserved

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