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  • Bioconductor

    calendar Nov 25, 2025 · 0 min read  ·
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  • Index

    calendar Nov 25, 2025 · 0 min read  ·
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  • Single Cell

    calendar Nov 25, 2025 · 0 min read  ·
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  • Code

    calendar Nov 23, 2025 · 0 min read  ·
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  • Plots

    calendar Nov 23, 2025 · 0 min read  ·
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  • Uv

    calendar Oct 14, 2025 · 0 min read  ·
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  • Pseudoalignment

    calendar Aug 31, 2025 · 0 min read  ·
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  • RNAseq

    calendar Aug 31, 2025 · 0 min read  ·
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  • Dimensional Reduction

    calendar Jun 5, 2025 · 0 min read  ·
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  • Phate

    calendar May 25, 2025 · 0 min read  ·
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Alfonso Saera Vila

Welcome to 'Love, DNA & Code' my blog about new bioinformatics tools, single-cell & spatial applications, AI, and more.
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Featured Posts

  • Visium HD cell segmentation with Bin2Cell
  • Single cell in Python: Scanpy and AnnData

Recent Posts

  • BiocPy: Bioconductor in Python
  • Bringing the Tidyverse to Python: plotnine, siuba, and pyjanitor
  • Use uv for python and forget about anything else!
  • Building Your First Nextflow Pipeline: PART 4 - Polish your pipeline
  • Building Your First Nextflow Pipeline: PART 3 - Modularization & Configurable settings
  • Building Your First Nextflow Pipeline: PART 2 - Multiple Samples
  • Alignment or Pseudoalignment: Alevin-fry vs Cell Ranger comparison
  • Building Your First Nextflow Pipeline: PART 1 - One sample at a time

Categories

BIOINFORMATICS 21 R 10 PYTHON 9 TECHNOLOGY 5 NEXTFLOW 4 CODE 2

Tags

CODE 17 SINGLE CELL 17 RNASEQ 9 BIOCONDUCTOR 6 PSEUDOALIGNMENT 4 CELL SEGMENTATION 3 DIMENSIONAL REDUCTION 3 PSEUDOTIME 3 PYTHON 3 SPATIAL 3 AI 2 PLOTS 2 RNA VELOCITY 2 TRAJECTORY ANALYSIS 2
All Tags
AI2 BIOCONDUCTOR6 CELL ANNOTATION1 CELL SEGMENTATION3 CHATGPT1 CODE17 DEEP LEARNING1 DIMENSIONAL REDUCTION3 INDEX1 LLM1 PHATE1 PLOTS2 PSEUDOALIGNMENT4 PSEUDOTIME3 PYTHON3 RNA VELOCITY2 RNASEQ9 SCANPY1 SCVELO1 SEURAT1 SINGLE CELL17 SPATIAL3 T-SNE1 TENSORFLOW1 TRAJECTORY ANALYSIS2 UMAP1 UV1
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Copyright © 2008–2025, Alfonso Saera plus the clarity & Hugo Authors

Copyright  COPYRIGHT © 2008–2025, ALFONSO SAERA PLUS THE CLARITY & HUGO AUTHORS. All Rights Reserved

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